JIT input matching fixed; pnpm dependencies preserved during prune

<!-- Release notes generated using configuration in .github/release.yml at v2.10.7-canary.1 -->

What's Changed

Changelog

• release(turborepo): 2.10.6-canary.5 by @github-actions[bot] in https://github.com/vercel/turborepo/pull/13424
• chore: Upgrade brace-expansion by @anthonyshew in https://github.com/vercel/turborepo/pull/13429
• chore: Update tar to 7.5.18 by @anthonyshew in https://github.com/vercel/turborepo/pull/13428
• chore: Upgrade js-yaml by @anthonyshew in https://github.com/vercel/turborepo/pull/13427
• fix: Match JIT inputs for affected tasks by @anthonyshew in https://github.com/vercel/turborepo/pull/13426
• fix: Preserve project Yarn package extensions by @anthonyshew in https://github.com/vercel/turborepo/pull/13425
• release(turborepo): 2.10.6 by @github-actions[bot] in https://github.com/vercel/turborepo/pull/13431
• chore: Refine bug report template help section by @anthonyshew in https://github.com/vercel/turborepo/pull/13433
• fix: Verify version after attempting codemod upgrade by @anthonyshew in https://github.com/vercel/turborepo/pull/13446
• test: Characterize JavaScript package discovery by @anthonyshew in https://github.com/vercel/turborepo/pull/13440
• refactor: Separate package graph node assembly by @anthonyshew in https://github.com/vercel/turborepo/pull/13441
• fix: Upgrade @vercel/connect by @anthonyshew in https://github.com/vercel/turborepo/pull/13450
• refactor: Add authoritative package knowledge by @anthonyshew in https://github.com/vercel/turborepo/pull/13442
• feat: Select runnable task entrypoints by @anthonyshew in https://github.com/vercel/turborepo/pull/13452
• refactor: Add workspace root contribution contract by @anthonyshew in https://github.com/vercel/turborepo/pull/13447
• refactor: Use package knowledge for scope selection by @anthonyshew in https://github.com/vercel/turborepo/pull/13443
• fix: Prevent mobile homepage overflow by @anthonyshew in https://github.com/vercel/turborepo/pull/13453
• docs: Document service readiness probes by @anthonyshew in https://github.com/vercel/turborepo/pull/13472
• fix: Preserve pnpm root dependencies during prune by @anthonyshew in https://github.com/vercel/turborepo/pull/13476
• fix: Preserve pnpm aliased dependencies during prune by @anthonyshew in https://github.com/vercel/turborepo/pull/13477

Full Changelog: https://github.com/vercel/turborepo/compare/v2.10.6-canary.5...v2.10.7-canary.1